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Freedom251 › Blog › AI Datasets

How to Set Up a NAS for Storing Large AI Datasets

By Freedom251 Team · · 14 min read

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The reliable way to store large AI datasets on a NAS is to design the workload first, then build a redundant pool, separate datasets by access and retention needs, publish the right SMB or NFS shares, and benchmark the complete training path from storage to GPU. There is no universal disk count, NAS size, RAID level, or network speed: those choices depend on dataset growth, recovery objectives, client count, file layout, and the input rate your training jobs actually require.

Start with workload and recovery targets

A NAS is only useful to a training system when it can deliver batches at the rate the accelerators consume them and still recover from the failures you consider acceptable. Write down the targets before selecting a chassis or disks.

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Measure data volume, not just the first download

  • Record the current size of original data, labels, metadata, preprocessing outputs, indexes, and checkpoints.
  • Estimate monthly and annual growth, including new training runs and temporary staging space.
  • Count files and note their size distribution. Millions of small files create different filesystem and metadata pressure from a similar number of large media files.
  • Decide how much free space you will reserve for growth, snapshots, rebuild work, and temporary transformations. A pool that is technically full can become slow or difficult to recover.

Describe how training reads the data

Document whether jobs perform mostly sequential scans, random sample reads, repeated epochs, or a mixture. Note whether files are rewritten in place, replaced in batches, or treated as immutable. Record how many training hosts and data-loader processes will read concurrently, and set an acceptable sustained input rate per host. Include validation, evaluation, and checkpoint traffic; a training set is not the only workload competing for the NAS.

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Set recovery objectives

Specify the disk failures you need the pool to tolerate, the maximum acceptable time to restore service, and how far back you must recover an accidentally deleted or corrupted dataset. These requirements determine the balance among usable capacity, redundancy, rebuild behavior, snapshots, replication, and an independent backup. RAID or a mirror keeps a pool available after certain disk failures; it is not a complete backup.

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Choose the NAS chassis, disks, and network

Choose hardware only after the targets above are written down. The chassis needs enough bays for the planned usable capacity, the selected pool layout, a replacement disk, and future growth if expansion is part of your plan. Verify that the operating system supports the controller, network adapters, memory configuration, and disk types.

Compare usable capacity rather than raw terabytes

Sum of disk labels is raw capacity, not the space available to datasets. Subtract the capacity consumed by the chosen redundancy layout and leave room for snapshots, metadata, growth, and maintenance. Make a worksheet with at least these columns:

Planning item What to record Why it changes the purchase
Raw disk capacity Number and size of compatible drives Sets the upper bound before redundancy and overhead
Usable pool capacity Capacity after the selected layout Determines whether current data and projected growth fit
Failure tolerance Disk failures the layout must survive Trades capacity and rebuild characteristics against protection
Reserved headroom Space for snapshots, staging, and growth Prevents a full pool from constraining jobs and recovery
Network path NAS interface, switch, client interface, and link speed Shows whether the network can carry measured storage throughput

Use compatible NAS drives

Use drives supported by the NAS platform and storage software. NAS-oriented SATA drives are commonly considered for capacity pools, while SSD or flash devices can reduce latency and improve small-file or random-access workloads at higher cost per usable terabyte. The hardware guide for your storage platform can identify interface, firmware, vibration, and endurance considerations, but it does not establish one drive model as best for every AI dataset.

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Do not buy 10GbE by assumption

A faster network interface helps only when benchmarking shows the existing path is the limiting component and the NAS, switch, cabling, and training client all support the upgrade. A 10GbE card on one side of a 1GbE link cannot increase end-to-end throughput. Measure first, then replace the slowest confirmed component.

Select a pool layout from capacity and failure requirements

Install the NAS operating system according to the stable documentation for its exact release. Development documentation can contain future-version changes; use it for concepts, but follow release-specific instructions for the interface and supported layouts shown on your system.

Mirror layouts

A mirrored vdev writes the same data to two or more disks. The simple mirrored example in TrueNAS documentation uses half the selected disks for storage and the other half for data protection. A mirror is easy to understand and can provide strong read behavior, but its usable capacity is lower than parity layouts and the exact failure tolerance depends on how mirrors are arranged.

Parity layouts such as RAIDZ

Parity layouts use information distributed across several disks to provide redundancy with more usable capacity than a mirror in some configurations. They also have different write, rebuild, and expansion characteristics. Compare the number of disks, tolerated failures, usable capacity, rebuild time, and the access pattern of your training data rather than selecting a level by name alone.

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A current development setup page recommends RAIDZ when a data vdev has fewer than ten disks. That is a version-specific development recommendation, not a universal rule. Confirm the guidance in the stable documentation matching your installed release and check the capacity calculator before committing data.

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Review the layout before creating it

  1. List the candidate layouts supported by your release.
  2. Enter the exact disk count and sizes in the platform’s capacity calculator.
  3. Compare usable capacity after redundancy and your reserved headroom.
  4. Check the documented failure tolerance and rebuild implications.
  5. Choose the layout that meets the recovery target while leaving enough capacity and performance for the measured workload.

Do not assume that adding disks later is always possible or equivalent to creating the correct vdev now. Expansion rules depend on the storage platform and layout.

Create the storage pool safely

  1. Install the NAS operating system and update it according to the stable release instructions for that version.
  2. Confirm that every intended disk is detected with the expected capacity and health information.
  3. Open the storage or pool creation screen and select only the disks assigned to this pool.
  4. Choose the reviewed mirror or parity layout; do not accept a default simply because it is available.
  5. Review the resulting usable capacity, redundancy, and warning messages before confirming. Pool creation usually destroys existing contents on the selected disks.
  6. After creation, record the pool name, layout, disk serials, and initial health state in your operations notes.

Run the platform’s health checks and monitoring setup before copying irreplaceable data. Configure alerts for disk errors, degraded vdevs, capacity thresholds, and failed scrubs or checks.

Organize the pool into datasets

A dataset is a filesystem inside a pool. Create separate datasets whenever access rules, sharing protocols, retention, snapshots, or administrative ownership differ. Keeping everything in the pool root makes permissions and recovery policies harder to reason about.

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A practical dataset map

Dataset example Typical contents Separate policy to consider
raw Original, immutable source files Read-mostly permissions and long retention
labels Annotations, class maps, and metadata Tighter write access and frequent snapshots
processed Decoded, resized, or normalized outputs Regeneration policy and larger temporary space
shards Tar-based or other packaged training samples Read-heavy access and reproducible indexes
checkpoints Model weights and optimizer state Separate retention and backup priority
staging Incoming uploads and in-progress jobs Short retention and controlled write access

Use the dataset preset that matches the intended use, such as SMB, NFS or multiprotocol, generic, or an application-oriented preset. Presets can set sensible defaults, but inspect the resulting permissions and sharing properties for your release.

Choose SMB or NFS for the training clients

Both SMB and NFS are supported sharing paths in the TrueNAS ecosystem. Neither is a universal winner. Select the protocol that fits the operating systems, identity system, ACL model, and operational workflow of the machines that will train models, then test it from those actual machines.

When SMB is a practical choice

SMB is often convenient when Windows clients, directory-based identities, or Windows-style ACL administration are central to the environment. Confirm that the service account used by the training job receives the intended dataset permissions and that credential handling works for unattended jobs.

When NFS is a practical choice

NFS can fit Linux-heavy training clusters and workflows that expect Unix ownership and permissions. Check UID and GID mapping, root behavior, mount options, and how the client handles stale mounts or a temporarily unavailable server.

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Publish and verify a share

  1. Enable the selected file-sharing service in the NAS interface.
  2. Create a share that points to the specific dataset, not the entire pool.
  3. Set the dataset owner, group, ACLs, and service-level access rules for the training account.
  4. From each training machine, mount the share using that machine’s normal service account.
  5. Create a small test file if writes are required, read it back, and remove it.
  6. Run the test as the same account and through the same mount path used by the training launcher.

Test more than one client when jobs run concurrently. A share that works interactively for an administrator may fail for a scheduler, container, or system service with different credentials.

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Design the file layout for the data loader

File-per-sample layout

Keeping each image, audio clip, text record, or other sample as a separate file supports selective updates and random access. It also increases metadata operations, directory traversal, and open-close activity. This layout can be appropriate when jobs select small subsets or update individual samples often.

Sharded layout

For very large collections with many samples, benchmark a sharded format such as numbered tar archives. PyTorch-published material describes WebDataset-style tar shards: a sample and its related files are grouped into sequential archive members. Sharding can reduce the number of filesystem objects and make sequential reads more efficient, but it changes indexing, update, and recovery workflows.

Before converting, verify that the training framework can stream the format, that labels and metadata remain associated with each sample, and that shard boundaries do not undermine shuffling or reproducibility. Keep the source data or a reproducible build process so processed shards can be regenerated.

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Do not generalize historical NFS results

A 2020 PyTorch large-dataset I/O article reported approximately 10–20 MBytes/s per drive for NFS in its own comparison. That figure is historical and workload-specific; it is not a prediction for a current NAS, disk, network, or training framework. Use it only as context for why measured access patterns matter.

Mount the dataset on a training server

Mount paths should be stable across workers and jobs. Use a consistent directory such as /mnt/ai-data on every Linux client, or an equivalent mapped path on other systems, and keep the application configuration independent of a user’s interactive home directory.

  1. Create the mount point with the permissions required by the training service.
  2. Mount the SMB or NFS share using the service account and security settings approved for your environment.
  3. Confirm that the expected dataset directories, indexes, and metadata are visible.
  4. Run a small read test and, if permitted, a write-and-delete test in the staging dataset.
  5. Configure persistent mounting only after the interactive test succeeds, and define what should happen when the NAS is unavailable.
  6. Start a representative training job and verify that every worker sees the same path and permissions.

A containerized job may need an explicit bind mount or volume declaration. Check the path from inside the container rather than assuming a host mount is automatically visible.

Benchmark the complete training pipeline

Storage benchmarks run on the NAS alone do not tell you whether a GPU will be fed quickly enough. Measure from the actual training client, using the real dataset format, transforms, batch size, number of workers, and concurrency.

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Capture the baseline

  • Sustained sequential read and write throughput from one client.
  • Read throughput with the expected number of simultaneous clients.
  • Latency or operation rate for the small-file pattern, if applicable.
  • CPU and memory use on the NAS and training host.
  • GPU utilization and the time spent waiting for batches.
  • Job throughput, such as samples or batches processed per second.

Run a short warm-cache test and a cold-cache or freshly staged test when both conditions matter. Record dataset, pool layout, protocol, client hardware, concurrency, and date with every result so later changes are comparable.

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Tune PyTorch data-loader workers

PyTorch documentation identifies network drives and HDDs as situations where additional data-loader workers may help, especially when transforms or decoding are expensive or the GPU is idle waiting for data. Increase num_workers gradually and stop when training throughput plateaus. Too many workers consume CPU and memory, add contention on the NAS, and can reduce rather than improve performance.

  1. Run the workload with the current worker count and record samples per second and GPU idle time.
  2. Increase the worker count in a small step.
  3. Repeat the same run and check host CPU, memory, NAS load, and batch wait time.
  4. Keep the higher value only if end-to-end throughput improves without exhausting resources.
  5. Stop increasing when results plateau or regress.

Find the bottleneck before upgrading

Observation Likely constraint to investigate Next check
NAS interface is saturated while disks are below their limits Network path Verify switch, cabling, client link, and protocol overhead
Disks are busy and latency rises with concurrent jobs Pool media or layout Compare HDD and flash options and review access pattern
NAS CPU is saturated during protocol or checksum work NAS processor or settings Measure with the same clients and services enabled
Training host CPU is full and workers compete for memory Client data-loader configuration Reduce or retune workers and transforms
GPU is idle while storage and network are quiet Decoding, augmentation, or application pipeline Profile transforms and batch preparation

Only after this comparison should you consider a 10GbE adapter, a switch upgrade, flash storage, a different pool layout, or more client memory. The fastest component on paper cannot fix a bottleneck elsewhere in the path.

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Protect originals, labels, and checkpoints

Use several protection layers with different failure domains.

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Snapshots for point-in-time recovery

Snapshots can help recover a deleted file, a damaged label set, or an unwanted bulk change. Set schedules and retention according to how often data changes and how far back you need to recover. Snapshot space consumes pool capacity, so monitor it rather than treating snapshots as free copies.

Replication for another system

Snapshot replication can move recoverable states to another NAS or location. It improves recovery from a pool or chassis problem, but the destination must be protected and monitored separately. Define which datasets and checkpoint versions are replicated and how long they remain available.

Independent backup

Maintain an independent backup destination for original data, labels, metadata, and the checkpoints that would be costly to recreate. A mirror, parity pool, or local snapshot shares the same primary system or operational assumptions and therefore does not replace an independent backup.

  1. List the data that must be recoverable and its acceptable loss window.
  2. Choose snapshot schedules and retention for short-term mistakes.
  3. Choose a replication or backup destination in a separate failure domain.
  4. Document encryption, credentials, and restore dependencies.
  5. Perform a test restore of files, permissions, metadata, and at least one usable checkpoint.
  6. Record the restore time and fix any gap before declaring the system protected.

Control permissions and operational access

Use separate service identities for ingestion, preprocessing, training, and administration where practical. Give training jobs read-only access to raw and finalized datasets, and grant write access only to staging or checkpoint locations that require it. This limits accidental deletion and makes audit trails easier to interpret.

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Keep ACLs and Unix ownership consistent with the selected protocol. Document which account owns each share, how credentials are rotated, and how a replacement training host receives access. Test permissions after changing a dataset preset, protocol, or identity provider.

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Common setup failures and fixes

The pool has less space than expected

Raw disk totals do not account for redundancy, filesystem overhead, snapshots, or reserved headroom. Recheck the capacity calculator with the exact disks and layout, remove unnecessary copies, and postpone new data until a sustainable free-space threshold is restored. Do not fill the pool simply because the dashboard reports that capacity as technically available.

The training job cannot see the share

Check the mount from the training account, not an administrator shell. Verify the share path, service status, firewall, DNS or address, dataset ACL, UID/GID or directory identity mapping, and container volume configuration. A successful interactive mount does not prove that a scheduler or container has the same credentials.

Reads are fast for one client but slow for several

Run the same test with the expected concurrency and inspect network, NAS CPU, disk latency, and protocol behavior. A layout that is adequate for one sequential reader may not serve many random readers. Consider sharding, a different dataset layout, flash for the hot set, or a measured network upgrade only after identifying the limiting resource.

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GPUs remain idle after increasing workers

More workers are not automatically better. Check whether decoding and augmentation, client CPU, memory pressure, network waits, or NAS latency is responsible. Increase workers only until throughput plateaus; then profile the transform pipeline or change the data representation.

A disk fails during a job

Follow the storage platform’s documented replacement procedure for the exact layout and release. Confirm the replacement disk, start the rebuild, and monitor health and performance until it completes. Avoid treating a degraded pool as a normal training state: reduce nonessential load and verify that a current backup or replicated copy is available.

A label or shard was overwritten

Stop processes that could continue propagating the error, identify the affected dataset and time, and restore the required files from a snapshot or independent backup. After recovery, rerun validation and record which job or account made the change.

A repeatable deployment checklist

  • Workload size, growth, file count, access pattern, client count, and target input rate are documented.
  • Raw data, processed data, labels, metadata, and checkpoints are included in capacity planning.
  • Disk bays, compatible drives, memory, controller, and network interfaces meet the target.
  • Pool layout has been compared for usable capacity, tolerated failures, rebuild behavior, and workload performance.
  • Stable, version-specific NAS documentation has been used for installation and pool creation.
  • Datasets separate raw, processed, labels, shards, checkpoints, and staging according to policy.
  • SMB or NFS was selected for the actual clients and tested with the real service account.
  • Training hosts and containers mount a consistent path and can read the intended data.
  • File-per-sample and sharded layouts were compared where small-file overhead matters.
  • End-to-end benchmarks include concurrent clients, data-loader workers, GPU wait time, and NAS resource use.
  • Snapshots, replication, an independent backup, retention, and a tested restore procedure are documented.
  • Alerts and maintenance records cover disk health, capacity, scrub or check failures, and degraded pools.

How to decide whether the NAS is ready for production training

Consider the NAS ready when a representative job sustains its required input rate with the expected number of clients, the pool retains the planned capacity headroom, permissions work for unattended services, and a restore test recovers the files and metadata the team actually needs. If any of those conditions fails, changing the brand or adding a faster link is premature; measure the failing stage, correct that stage, and repeat the end-to-end test.

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