Side by side
CGView.js vs ggoncoplot
Both stand on data visualization software. Which one you can start free with, which one lets you read the code, and what each costs once you pay.
Free plan APIWeb
CGView.js provides programmable genome maps with substantial visualization and export options. Developers should account for its D3 dependency and the additional library needed for SVG output.
Visit CGView.js Free plan Linux
ggoncoplot focuses on interactive mutation visualization with flexible inputs, annotations, and palette controls. Larger sample-by-gene plots may respond more slowly, especially when tooltips contain substantial information.
Visit ggoncoplotThe facts
| CGView.js | ggoncoplot | |
|---|---|---|
| Free plan | Yes | Yes |
| Open source | Not published | Not published |
| Runs on | API, Web | Linux |
| Lowest paid plan | Not published | Free or on request |
| Plans published | None | 1 |
| Maker | Not published | Not published |
| Website | js.cgview.ca | selkamand.github.io |
| On data visualization software | #74 of 98 | #70 of 98 |
CGView.js: what it does well
- Supports circular and linear genome views
- Handles genomes up to 10 Mbp
- Zooms smoothly to sequence level
- Exports large PNGs and SVG maps
- Offers API access and custom plugins
What to know first
- Requires D3 version 6 or 7
- SVG export needs optional svgcanvas
- Works with JavaScript project installation
ggoncoplot: what it does well
- Free and open source
- Interactive tooltips and cross-selection
- Gene and mutation burden barplots
- Custom gene, order, and palette controls
- Supports pathway and metadata overlays
What to know first
- Linux desktop platform only
- Responsiveness can slow with larger tile counts
- No free trial because it is free software
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