Nanome

Nanome is ranked #10 of 49 in 3D visualization software on Freedom251. It runs on Android, API, Self-hosted, Web, Windows. There is a free plan. A free trial is offered. Paid plans start at $4.17/mo.

Nanome plans and pricing

All plans

Starter / Free Web Seat Free 3 workspaces · 1 project · 50 MARA credits · 5 most recent files · 7 days of chat history nanome.ai · 29 Sept 2026

Academic Department Full Web Seat $4.17/mo Billed annually Starting at · Minimum 50 licenses nanome.ai · 29 Sept 2026

Academic Department Full seat $12.50/mo Billed annually MCP calls: Custom · Minimum 50 licenses nanome.ai · 29 Sept 2026

Academic Personal Full seat $20.83/mo Billed annually 100 MCP calls · Nanome-hosted shared tenant collaboration server · 300+ tools nanome.ai · 29 Sept 2026

Commercial Cloud / Enterprise Not published Custom MCP calls · Cloud or Enterprise deployment · Premium support nanome.ai · 29 Sept 2026

Compared on 3D visualization software

Free plan: Yes
Paid from: $4.17/user/mo
Supported platforms: Web, Windows, Android XR, supported XR headsets
Supported file formats: PDB, mmCIF/PDBx, SDF, MOL, MOL2, SMILES, XYZ, PQR, PDBQT, MAE, MAEGZ, MOE, PSE, GRO, XTC, TRR, DCD, DX
Measurement tools: Yes
Annotations or markup: Yes
Presentation mode: Yes
Sharing access: both

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Free6.6

Nanome

Product: Nanome is a collaborative molecular visualization and drug discovery platform for reviewing protein and small-molecule structures across web, XR headsets, and its MARA AI copilot.
Visualization: The platform includes measurement, selection, builder, protein-ligand interaction analysis, docking pose review, molecular dynamics playback, and rendering tools.
Collaboration: Multiple people can join the same workspace in real time across web and XR.
Integrations: Nanome lists integrations including Schrödinger LiveDesign, CDD Vault, OpenEye/Cadence, Discngine 3decision, KNIME Server, CCG MOE, Boltz, and OpenFold.
Scientific tools: MARA provides a growing library of 300+ scientific tools across 26 categories, including docking, structure prediction, cheminformatics, genomics, and materials science.
Programmatic access: Nanome provides a REST API for every MARA tool, plus Jupyter integration and a Claude Code skill and MCP server.
Deployment: Commercial Enterprise supports private cloud or on-prem deployment, internal database integration, custom or internal LLM and MCP servers, and custom development.
Supported devices: The setup page lists Meta Quest 3 and 3S, Samsung Galaxy XR, Apple Vision Pro, Windows PCs over Meta Link, and the browser app without a headset.
File support: The free web tier allows direct upload of PDB, SDF, and CIF files.
Trial: Every new account gets a 14-day Full license trial with no credit card required.
Academic users: Academic Personal is intended for individual students and researchers, while Academic Department targets institutions and labs deploying at scale and has a 50-license minimum.
Support: The pricing page describes premium customer support for Commercial Cloud, and setup assistance and managed devices for Academic Department deployments.
Account security: Nanome account administrators can configure single sign-on and enable two-factor authentication in license management.
Notable limits: Starter provides web-based visualization with three workspaces, one project, 50 MARA credits, five most recent files, and seven days of chat history.
Price from: $4.17/mo

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Where it ranks on Freedom251

Best 3D Visualization Software in 2026#10 of 49
Best 3D Model Viewer Software in 2026#9 of 29

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Sources

nanome.ai· checked 29 Sept 2026
nanome.ai/integrations· checked 29 Sept 2026
nanome.ai/pricing· checked 29 Sept 2026
nanome.ai/setup· checked 29 Sept 2026